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In mzidentML export link Peptide->Modification to SearchModification

Status: Open.

#56 In Rappsilber-Laboratory/xiFDR;

· lutzfischer opened on Jul 22, 2025

Error reading mzid files

Status: Open.

#50 In Rappsilber-Laboratory/xiFDR;

· enriquead1 opened on Feb 4, 2025

inconsistency re. whether the "crosslink donor" CV term is accompanied by another CV term giving accession

Status: Open.

#30 In Rappsilber-Laboratory/xiFDR;

· colin-combe opened on May 1, 2023

Group by search

Status: Open.

#26 In Rappsilber-Laboratory/xiFDR;

· fjoreilly opened on Jul 23, 2021

Add a progress bar or similar to give the user a feeling how far the analysis currently is.

Status: Open.

#23 In Rappsilber-Laboratory/xiFDR;

· cforbrig opened on Nov 25, 2019

Add peptide infos to "peptide pair" file

Status: Open.

#22 In Rappsilber-Laboratory/xiFDR;

· ludsinn opened on Nov 25, 2019

<Threhold> tag does not show the right cv-param

Status: Open.

#20 In Rappsilber-Laboratory/xiFDR;

· lutzfischer opened on Oct 23, 2019

low scoring matches marked as passing threshold

Status: Open.

#15 In Rappsilber-Laboratory/xiFDR;

· swlenz opened on Mar 18, 2018

Missing cross-linker mass in csv based mzid

Status: Open.

#14 In Rappsilber-Laboratory/xiFDR;

· swlenz opened on Mar 16, 2018

Multiple FASTA files and mzIdentML

Status: Open.

#16 In Rappsilber-Laboratory/xiFDR;

· lutzfischer opened on Feb 26, 2018

Non standard enzymes in mzIdentML

Status: Open.

#17 In Rappsilber-Laboratory/xiFDR;

· lutzfischer opened on Feb 26, 2018

Empty columns in XiFDR links file

Status: Open.

#11 In Rappsilber-Laboratory/xiFDR;

· ludsinn opened on Jun 29, 2017