Currently xiFDR can only export a single standard predefined enzymes to mzIdentML. If something else is used (e.g. multiple enzymes) xiFDR will just offer to pick a standard enzyme from a given list.
It should parse the xisearch rules and translate these into the mzIdentML required regular expression or parse multistep digest and find the corresponding enzymes.
Currently xiFDR can only export a single standard predefined enzymes to mzIdentML. If something else is used (e.g. multiple enzymes) xiFDR will just offer to pick a standard enzyme from a given list.
It should parse the xisearch rules and translate these into the mzIdentML required regular expression or parse multistep digest and find the corresponding enzymes.