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Merged
gmyenni merged 1 commit into from
Apr 2, 2026
Merged

Add weather data from 2016 station [patch] #607

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28 changes: 15 additions & 13 deletions DataCleaningScripts/new_weather_data.R
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Original file line number Diff line number Diff line change
Expand Up @@ -20,22 +20,24 @@ new_met_data <- function() {
#httr::set_config(httr::timeout(seconds = 120))

# To read from .dat file
# header=read.table("~/Dropbox (UFL)/Portal/PORTAL_primary_data/Weather/Raw_data/2016_Station/517_CR1000_remote_MET.dat",
# skip = 1, nrow = 1, header = FALSE, sep=",", stringsAsFactors = FALSE)
# header=read.table("~/Dropbox (UFL)/Portal/PORTAL_primary_data/Weather/Raw_data/2016_Station/549_CR1000_remote_hourly.dat",
# skip = 1, nrow = 1, header = FALSE, sep=",", stringsAsFactors = FALSE)
#
# rawdata=read.table("~/Dropbox (UFL)/Portal/PORTAL_primary_data/Weather/Raw_data/2016_Station/517_CR1000_remote_MET.dat",
# skip = 4, header = FALSE,sep=",") %>%
# `colnames<-`(header) %>%
# dplyr::rename(airtemp=AirTC_Avg,precipitation=Rain_mm_Tot,timestamp=TIMESTAMP,record=RECORD,
# battv=BattV_Avg,soiltemp=Soil_C_Avg,PTemp_C=PTemp_C_Avg,BP_mmHg_Avg=BP_mmHg)
# rawdata=read.table("~/Dropbox (UFL)/Portal/PORTAL_primary_data/Weather/Raw_data/2016_Station/549_CR1000_remote_hourly.dat",
# skip = 4, header = FALSE,sep=",") %>%
# `colnames<-`(header) %>%
# dplyr::rename(airtemp=AirTC_Avg,precipitation=Rain_mm_Tot,timestamp=TIMESTAMP,record=RECORD,
# battv=BattV_Avg,soiltemp=Soil_C_Avg,PTemp_C=PTemp_C_Avg,BP_mmHg_Avg=BP_mmHg) %>%
# dplyr::mutate(timestamp = lubridate::ymd_hms(format(timestamp, format = "%Y-%m-%d %T %Z")))
#
# header_storms=read.table("~/Dropbox (UFL)/Portal/PORTAL_primary_data/Weather/Raw_data/2016_Station/CR1000_remote_storms.dat",
# skip = 1, nrow = 1, header = FALSE, sep=",", stringsAsFactors = FALSE)
# header_storms=read.table("~/Dropbox (UFL)/Portal/PORTAL_primary_data/Weather/Raw_data/2016_Station/549_CR1000_remote_storms.dat",
# skip = 1, nrow = 1, header = FALSE, sep=",", stringsAsFactors = FALSE)
#
# stormsnew=read.table("~/Dropbox (UFL)/Portal/PORTAL_primary_data/Weather/Raw_data/2016_Station/CR1000_remote_storms.dat",
# skip = 4, header = FALSE,sep=",") %>%
# `colnames<-`(header_storms) %>%
# dplyr::rename(precipitation=Rain_mm_Tot,timestamp=TIMESTAMP,record=RECORD,battv=BattV_Min)
# stormsnew=read.table("~/Dropbox (UFL)/Portal/PORTAL_primary_data/Weather/Raw_data/2016_Station/549_CR1000_remote_storms.dat",
# skip = 4, header = FALSE,sep=",") %>%
# `colnames<-`(header_storms) %>%
# dplyr::rename(precipitation=Rain_mm_Tot,timestamp=TIMESTAMP,record=RECORD,battv=BattV_Min) %>%
# dplyr::mutate(timestamp = lubridate::ymd_hms(format(timestamp, format = "%Y-%m-%d %T %Z")))

today <- lubridate::ymd_hms(gsub(":\\d+:\\d+",":00:00",Sys.time()))
# Pull raw data (latest week of records, plus some overlap for safety) & rename columns
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46 changes: 21 additions & 25 deletions Weather/Portal_weather.csv
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Original file line number Diff line number Diff line change
Expand Up @@ -308326,27 +308326,27 @@
2026,3,31,900,"2026-03-31 09:00:00",25865,13.28,17.45,18.98,44.72,0,765.5,0.485,1.384618,0.28,1.692,3.038,99.9,3.038,89.6,0.063,18.91,0,12.4,18.91,16.32
2026,3,31,1000,"2026-03-31 10:00:00",25866,13.57,21.6,22.28,37.3,0,765.9,0.71,2.002764,0.427,2.409,3.008,41.68,3.008,79.37,0.056,22.23,0,17.39,22.23,18.4
2026,3,31,1100,"2026-03-31 11:00:00",25867,13.48,25.34,24.62,32.09,0,765.5,0.817,2.759357,0.56,2.952,1.748,29.17,1.748,29.08,0.05,24.57,0,21.82,24.57,21.97
2026,3,31,1200,"2026-03-31 12:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,1300,"2026-03-31 13:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,1400,"2026-03-31 14:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,1500,"2026-03-31 15:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,1600,"2026-03-31 16:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,1700,"2026-03-31 17:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,1800,"2026-03-31 18:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,1900,"2026-03-31 19:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,2000,"2026-03-31 20:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,2100,"2026-03-31 21:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,2200,"2026-03-31 22:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,2300,"2026-03-31 23:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,2400,"2026-04-01 00:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,100,"2026-04-01 01:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,200,"2026-04-01 02:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,300,"2026-04-01 03:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,400,"2026-04-01 04:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,500,"2026-04-01 05:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,600,"2026-04-01 06:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,700,"2026-04-01 07:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,800,"2026-04-01 08:00:00",,,,,,,,,,,,,,,,,,,,,
2026,3,31,1200,"2026-03-31 12:00:00",25868,13.38,28.27,26.28,28.99,0,765,1.07,3.205394,0.669,3.289,1.978,220.3,1.978,312.6,0.042,26.27,0,25.02,26.27,26.51
2026,3,31,1300,"2026-03-31 13:00:00",25869,13.07,29.46,26.37,24.34,0,764.9,0.309,1.899988,0.438,3.388,1.426,111.4,1.426,160.4,0.027,26.38,0,25.96,26.38,28.88
2026,3,31,1400,"2026-03-31 14:00:00",25870,13.12,28.98,26.68,25.59,0,764.2,0.529,2.157447,0.551,3.231,3.419,34.84,3.419,66.91,0.055,26.67,0,24.15,26.67,30.05
2026,3,31,1500,"2026-03-31 15:00:00",25871,13.08,29.43,27.44,21.16,0,763.2,0.538,2.061817,0.482,2.84,1.927,18.61,1.927,40.74,0.048,27.42,0,20.44,27.42,31.48
2026,3,31,1600,"2026-03-31 16:00:00",25872,13.23,29.82,27.5,22.29,0,762.8,0.234,1.114916,0.304,2.239,1.619,95.6,1.619,62.66,0.034,27.52,0,15.78,27.52,31.83
2026,3,31,1700,"2026-03-31 17:00:00",25873,13.26,28,26.38,22.23,0,762.7,0.121,0.647027,0.328,1.482,4.058,192.4,4.058,146.2,0.054,26.39,0,10.69,26.39,29.83
2026,3,31,1800,"2026-03-31 18:00:00",25874,13.06,26.35,25.21,25.98,0,762.7,0.039,0.2261426,0.198,0.648,2.936,203.5,2.936,199.4,0.063,25.23,0,5.433,25.23,27.87
2026,3,31,1900,"2026-03-31 19:00:00",25875,12.94,24.72,23.94,29.71,0,762.7,0.002,0.1125963,0.081,0.049,2.69,177.2,2.69,201.5,0.061,23.97,0,0.171,23.97,26.16
2026,3,31,2000,"2026-03-31 20:00:00",25876,12.86,22.66,21.92,34.06,0,762.8,0,0.0002855395,0.06,0,1.762,163,1.762,187.5,0.062,21.95,0,-5.138,21.95,24.52
2026,3,31,2100,"2026-03-31 21:00:00",25877,12.84,21.22,21.36,32.22,0,763.1,0,0,0.046,0,1.349,114.1,1.349,124.2,0.044,21.36,0,-10.2,21.36,23.3
2026,3,31,2200,"2026-03-31 22:00:00",25878,12.82,20.34,20.85,33.83,0,763,0,0,0.058,0,1.884,174.7,1.884,106.6,0.046,20.83,0,-14.87,20.83,22.29
2026,3,31,2300,"2026-03-31 23:00:00",25879,12.81,20.8,21.92,38.05,0,762.9,0,0,0.063,0,2.019,148,2.019,162.9,0.061,21.95,0,-18.82,21.95,21.81
2026,3,31,2400,"2026-04-01 00:00:00",25880,12.78,20.41,20.66,35.28,0,763.1,0,0,0.055,0,1.841,142.7,1.841,140.2,0.051,20.66,0,-21.5,20.66,21.27
2026,4,1,100,"2026-04-01 01:00:00",25881,12.77,20.2,21.13,41.36,0,762.2,0,0,0.067,0,2.29,122.8,2.29,127.5,0.05,21.16,0,-22.23,21.16,20.88
2026,4,1,200,"2026-04-01 02:00:00",25882,12.75,19.16,19.4,36.94,0,762.4,0,0,0.043,0,1.573,93.8,1.573,170,0.059,19.38,0,-20.76,19.38,20.34
2026,4,1,300,"2026-04-01 03:00:00",25883,12.73,18.98,19.24,44.2,0,762.1,0,0,0.055,0,2.159,69.34,2.159,80.8,0.059,19.28,0,-17.56,19.28,20
2026,4,1,400,"2026-04-01 04:00:00",25884,12.7,18.02,17.86,45.81,0,761.6,0,0,0.052,0,2.255,98.7,2.255,81.8,0.059,17.88,0,-13.3,17.88,19.51
2026,4,1,500,"2026-04-01 05:00:00",25885,12.67,17.34,17.82,37.83,0,761.7,0,0,0.058,0,2.584,122.7,2.584,113.1,0.061,17.8,0,-8.47,17.8,19.08
2026,4,1,600,"2026-04-01 06:00:00",25886,12.64,17.73,18.38,42.64,0,762,0,0,0.051,0,1.913,74.31,1.913,119.2,0.051,18.41,0,-3.314,18.41,18.88
2026,4,1,700,"2026-04-01 07:00:00",25887,12.63,17.29,17.65,43.5,0,761.9,0.035,0.02880092,0.081,0.153,2.056,93.9,2.056,99.5,0.062,17.63,0,2.027,17.63,18.64
2026,4,1,800,"2026-04-01 08:00:00",25888,12.77,17.82,18.98,39.5,0,761.7,0.139,0.3043261,0.173,0.909,3.567,105.6,3.567,110.6,0.059,18.95,0,7.288,18.95,18.82
2026,4,1,900,"2026-04-01 09:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,1000,"2026-04-01 10:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,1100,"2026-04-01 11:00:00",0,13.28,23.27,21.81,33.11,0,762.8,0.118,0.2476045,0.106,3.056,2.808,157.4,2.808,173.2,0.036,20.74,0,23.27,20.74,23.12
Expand All @@ -308356,7 +308356,3 @@
2026,4,1,1500,"2026-04-01 15:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,1600,"2026-04-01 16:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,1700,"2026-04-01 17:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,1800,"2026-04-01 18:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,1900,"2026-04-01 19:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,2000,"2026-04-01 20:00:00",,,,,,,,,,,,,,,,,,,,,
2026,4,1,2100,"2026-04-01 21:00:00",,,,,,,,,,,,,,,,,,,,,
42 changes: 21 additions & 21 deletions Weather/Portal_weather_overlap.csv
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Expand Up @@ -82390,27 +82390,27 @@
2026,3,31,900,"2026-03-31 09:00:00",25865,13.28,18.98,0,44.72,,,,,
2026,3,31,1000,"2026-03-31 10:00:00",25866,13.57,22.28,0,37.3,,,,,
2026,3,31,1100,"2026-03-31 11:00:00",25867,13.48,24.62,0,32.09,,,,,
2026,3,31,1200,"2026-03-31 12:00:00",,,,,,,,,,
2026,3,31,1300,"2026-03-31 13:00:00",,,,,,,,,,
2026,3,31,1400,"2026-03-31 14:00:00",,,,,,,,,,
2026,3,31,1500,"2026-03-31 15:00:00",,,,,,,,,,
2026,3,31,1600,"2026-03-31 16:00:00",,,,,,,,,,
2026,3,31,1700,"2026-03-31 17:00:00",,,,,,,,,,
2026,3,31,1800,"2026-03-31 18:00:00",,,,,,,,,,
2026,3,31,1900,"2026-03-31 19:00:00",,,,,,,,,,
2026,3,31,2000,"2026-03-31 20:00:00",,,,,,,,,,
2026,3,31,2100,"2026-03-31 21:00:00",,,,,,,,,,
2026,3,31,2200,"2026-03-31 22:00:00",,,,,,,,,,
2026,3,31,2300,"2026-03-31 23:00:00",,,,,,,,,,
2026,3,31,2400,"2026-04-01 00:00:00",,,,,,,,,,
2026,4,1,100,"2026-04-01 01:00:00",,,,,,,,,,
2026,4,1,200,"2026-04-01 02:00:00",,,,,,,,,,
2026,4,1,300,"2026-04-01 03:00:00",,,,,,,,,,
2026,4,1,400,"2026-04-01 04:00:00",,,,,,,,,,
2026,4,1,500,"2026-04-01 05:00:00",,,,,,,,,,
2026,4,1,600,"2026-04-01 06:00:00",,,,,,,,,,
2026,4,1,700,"2026-04-01 07:00:00",,,,,,,,,,
2026,4,1,800,"2026-04-01 08:00:00",,,,,,,,,,
2026,3,31,1200,"2026-03-31 12:00:00",25868,13.38,26.28,0,28.99,,,,,
2026,3,31,1300,"2026-03-31 13:00:00",25869,13.07,26.37,0,24.34,,,,,
2026,3,31,1400,"2026-03-31 14:00:00",25870,13.12,26.68,0,25.59,,,,,
2026,3,31,1500,"2026-03-31 15:00:00",25871,13.08,27.44,0,21.16,,,,,
2026,3,31,1600,"2026-03-31 16:00:00",25872,13.23,27.5,0,22.29,,,,,
2026,3,31,1700,"2026-03-31 17:00:00",25873,13.26,26.38,0,22.23,,,,,
2026,3,31,1800,"2026-03-31 18:00:00",25874,13.06,25.21,0,25.98,,,,,
2026,3,31,1900,"2026-03-31 19:00:00",25875,12.94,23.94,0,29.71,,,,,
2026,3,31,2000,"2026-03-31 20:00:00",25876,12.86,21.92,0,34.06,,,,,
2026,3,31,2100,"2026-03-31 21:00:00",25877,12.84,21.36,0,32.22,,,,,
2026,3,31,2200,"2026-03-31 22:00:00",25878,12.82,20.85,0,33.83,,,,,
2026,3,31,2300,"2026-03-31 23:00:00",25879,12.81,21.92,0,38.05,,,,,
2026,3,31,2400,"2026-04-01 00:00:00",25880,12.78,20.66,0,35.28,,,,,
2026,4,1,100,"2026-04-01 01:00:00",25881,12.77,21.13,0,41.36,,,,,
2026,4,1,200,"2026-04-01 02:00:00",25882,12.75,19.4,0,36.94,,,,,
2026,4,1,300,"2026-04-01 03:00:00",25883,12.73,19.24,0,44.2,,,,,
2026,4,1,400,"2026-04-01 04:00:00",25884,12.7,17.86,0,45.81,,,,,
2026,4,1,500,"2026-04-01 05:00:00",25885,12.67,17.82,0,37.83,,,,,
2026,4,1,600,"2026-04-01 06:00:00",25886,12.64,18.38,0,42.64,,,,,
2026,4,1,700,"2026-04-01 07:00:00",25887,12.63,17.65,0,43.5,,,,,
2026,4,1,800,"2026-04-01 08:00:00",25888,12.77,18.98,0,39.5,,,,,
2026,4,1,900,"2026-04-01 09:00:00",,,,,,,,,,
2026,4,1,1000,"2026-04-01 10:00:00",,,,,,,,,,
2026,4,1,1100,"2026-04-01 11:00:00",0,13.28,21.81,0,33.11,,,,,
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