a reproducible and scalable workflow for prokaryote genomic data analysis designed for the genera Enterococcus spp.
-
Updated
Mar 29, 2021 - Python
#
virulence-factors
Here are 6 public repositories matching this topic...
An interactive and user-friendly web application to explore the hospital microbiome and genetic makeup
metagenomics bioinformatics-pipeline pathogens antimicrobial-resistance mobile-genetic-elements r-shiny-app virulence-factors hospital-microbiome
-
Updated
Nov 3, 2025 - R
Curated genomic database of Staphylococcus aureus virulence factors, including enterotoxins, adhesins, and immune evasion genes. These determinants enable host colonisation, immune evasion, and tissue damage, forming the basis of pathogenic potential.
-
Updated
Apr 30, 2026
In silico PCR reference-based method for detecting microbial sequences.
-
Updated
Dec 15, 2025 - Python
Curated genomic database of Staphylococcal Pathogenicity Islands (SaPIs), mobile genetic elements in Staphylococcus aureus that contribute to virulence through carriage of enterotoxin and other virulence-associated genes.
bioinformatics genomics wgs food-safety mobile-genetic-elements staphylococcus-aureus virulence-factors bacterial-genomics sapis pathogenicity-islands enterotoxins
-
Updated
Apr 30, 2026
An R shiny application to explore the chicken gut microbiome and their genetic makeup
mobile-genetic-elements antibiotic-resistance-genes virulence-factors chicken-gut-microbiome zoonotic-pathogens dietary-interventions
-
Updated
Mar 30, 2026 - R
Improve this page
Add a description, image, and links to the virulence-factors topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the virulence-factors topic, visit your repo's landing page and select "manage topics."