refactor: split `.index` file into multiple by dkharms · Pull Request #389 · ozontech/seq-db

dkharms · 2026-03-31T12:06:46Z

Description

This is first pull request of series #336. Changes in this pull request will allow us to efficiently merge several fractions into one when performing compaction.

So .index gets split into several:

.info -- contains one info block;
.offsets -- contains one block with offsets of DocBlock inside .docs file;
.ids -- contains triplets of seq.MID, seq.RID and seq.DocPos blocks;
.tokens -- contains tokens and token table;
.lids -- contains chunks of seq.LID;

It's easy to notice that we expect increase in file descriptors usage by 3x

Several things I need to polish:

Reintroduce statistics reporting on sealing;
Backwards compatibility for sealed fractions which were offloaded to remote storage;
Delete all sealed fractions files if at least one file has tmp suffix;
Handle tmp .index files;

I have read and followed all requirements in CONTRIBUTING.md;
I used LLM/AI assistance to make this pull request;

If you have used LLM/AI assistance please provide model name and full prompt:

Model: Claude Sonnet 4.6
Context: I've used LLM to fix issues with index analyzer binary

github-actions · 2026-03-31T12:07:01Z

❌ PR Title Validation Failed
Please refer to CONTRIBUTING.md

dkharms · 2026-03-31T12:07:53Z

@seqbenchbot up main bulk

seqbenchbot · 2026-03-31T12:07:55Z

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codecov-commenter · 2026-03-31T12:10:19Z

Codecov Report

❌ Patch coverage is 61.08911% with 393 lines in your changes missing coverage. Please review.
✅ Project coverage is 70.73%. Comparing base (124d460) to head (4acc3e9).

Files with missing lines	Patch %	Lines
frac/sealed.go	50.25%	79 Missing and 19 partials ⚠️
frac/sealed_loader.go	41.86%	67 Missing and 8 partials ⚠️
cmd/index_analyzer/main.go	0.00%	50 Missing ⚠️
frac/remote.go	64.07%	25 Missing and 12 partials ⚠️
frac/sealed/sealing/index.go	60.46%	13 Missing and 21 partials ⚠️
frac/active_sealing_source.go	79.81%	10 Missing and 12 partials ⚠️
frac/sealed/sealing/sealer.go	67.16%	14 Missing and 8 partials ⚠️
frac/sealed/sealing/blocks_builder.go	86.08%	9 Missing and 7 partials ⚠️
frac/sealed/sealing/writer.go	70.37%	8 Missing and 8 partials ⚠️
fracmanager/frac_manifest.go	71.42%	14 Missing and 2 partials ⚠️
... and 1 more

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #389      +/-   ##
==========================================
- Coverage   71.40%   70.73%   -0.68%     
==========================================
  Files         219      219              
  Lines       16454    16845     +391     
==========================================
+ Hits        11749    11915     +166     
- Misses       3834     4029     +195     
- Partials      871      901      +30

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dkharms · 2026-03-31T12:50:10Z

@seqbenchbot down f70e7779

seqbenchbot · 2026-03-31T12:50:13Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator f70e7779 was finished.
I've prepared a summary for you. Click on Show summary button to see it:

Show summary

Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`75.47`	`75.95`	`+0.64%`	`31.14`	`32.51`	`+4.41%`	`67.00`	`66.00`	`-1.49%`	`140.00`	`144.00`	`+2.86%`	`191.00`	`196.00`	`+2.62%`	`56767.00`	`56645.00`	`-0.21%`

Have a great time!

dkharms · 2026-03-31T12:50:45Z

@seqbenchbot up main mixed

seqbenchbot · 2026-03-31T12:50:59Z

Nice, @dkharms <(-^,^-)=b!

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dkharms · 2026-03-31T13:08:17Z

@seqbenchbot down e47604c9

seqbenchbot · 2026-03-31T13:08:20Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator e47604c9 was finished.
I've prepared a summary for you. Click on Show summary button to see it:

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Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`75.44`	`75.74`	`+0.40%`	`30.28`	`30.81`	`+1.74%`	`67.00`	`68.00`	`+1.49%`	`136.50`	`140.00`	`+2.56%`	`188.00`	`191.00`	`+1.60%`	`21032.00`	`21063.00`	`+0.15%`
`service:payment-backend-eu AND k8s_namespace:prod AND level:[0 to 3] AND ( message:'failed' OR message:'timeout' )`	warm	`71.49`	`71.26`	`-0.32%`	`25.23`	`24.94`	`-1.14%`	`65.00`	`65.00`	`0.00%`	`124.00`	`121.00`	`-2.42%`	`173.50`	`171.00`	`-1.44%`	`3459.00`	`3466.00`	`+0.20%`

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dkharms · 2026-03-31T13:09:17Z

@seqbenchbot up main bulk

seqbenchbot · 2026-03-31T13:09:21Z

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dkharms · 2026-03-31T13:21:03Z

@seqbenchbot down 3a13f7af

seqbenchbot · 2026-03-31T13:21:06Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator 3a13f7af was finished.
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Show summary

Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`70.93`	`70.93`	`-0.00%`	`26.40`	`27.66`	`+4.80%`	`64.00`	`63.00`	`-1.56%`	`124.50`	`127.00`	`+2.01%`	`165.00`	`170.00`	`+3.03%`	`13088.00`	`13154.00`	`+0.50%`

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dkharms · 2026-03-31T13:22:06Z

@seqbenchbot up main bulk

seqbenchbot · 2026-03-31T13:22:10Z

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dkharms · 2026-03-31T13:34:08Z

@seqbenchbot down 29e733d8

seqbenchbot · 2026-03-31T13:34:11Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator 29e733d8 was finished.
I've prepared a summary for you. Click on Show summary button to see it:

Show summary

Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`69.95`	`69.78`	`-0.25%`	`26.18`	`26.57`	`+1.50%`	`63.00`	`63.00`	`0.00%`	`122.00`	`123.00`	`+0.82%`	`162.00`	`166.00`	`+2.47%`	`13679.00`	`13623.00`	`-0.41%`

Have a great time!

dkharms · 2026-03-31T13:36:28Z

@seqbenchbot up main bulk

seqbenchbot · 2026-03-31T13:36:31Z

Nice, @dkharms <(-^,^-)=b!

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dkharms · 2026-03-31T14:06:56Z

@seqbenchbot down b1727103

seqbenchbot · 2026-03-31T14:06:59Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator b1727103 was finished.
I've prepared a summary for you. Click on Show summary button to see it:

Show summary

Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`72.81`	`72.37`	`-0.60%`	`29.14`	`28.83`	`-1.06%`	`65.00`	`64.00`	`-1.54%`	`132.00`	`130.00`	`-1.52%`	`175.00`	`179.00`	`+2.29%`	`40040.00`	`39925.00`	`-0.29%`

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github-actions · 2026-03-31T17:32:49Z

🔴 Performance Degradation

Some benchmarks have degraded compared to the previous run.
Click on Show table button to see full list of degraded benchmarks.

Show table

Name	Previous	Current	Ratio	Verdict
`MutexListAppend-4`	`5115f7`	`674dbc`
	`196.07 MB/s`	`168.78 MB/s`	`0.86`	`🔴`
	`83287562.00 ns/op`	`94799666.00 ns/op`	`1.14`	`🔴`

github-actions · 2026-04-02T08:59:24Z

🔴 Performance Degradation

Some benchmarks have degraded compared to the previous run.
Click on Show table button to see full list of degraded benchmarks.

Show table

Name	Previous	Current	Ratio	Verdict
`MutexListAppend-4`	`5115f7`	`30cda4`
	`196.07 MB/s`	`174.63 MB/s`	`0.89`	`🔴`

dkharms · 2026-04-16T14:18:07Z

@seqbenchbot down cfc11182

seqbenchbot · 2026-04-16T14:18:10Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator cfc11182 was finished.
I've prepared a summary for you. Click on Show summary button to see it:

Show summary

Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`62.06`	`61.62`	`-0.70%`	`21.63`	`21.82`	`+0.88%`	`56.00`	`56.00`	`0.00%`	`105.00`	`105.00`	`0.00%`	`143.00`	`143.00`	`0.00%`	`42231.00`	`42250.00`	`+0.04%`

Have a great time!

dkharms · 2026-04-16T14:18:57Z

@seqbenchbot up main bulk

seqbenchbot · 2026-04-16T14:19:00Z

Nice, @dkharms <(-^,^-)=b!

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dkharms · 2026-04-16T14:29:04Z

@seqbenchbot down 3dd6ec65

seqbenchbot · 2026-04-16T14:29:08Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator 3dd6ec65 was finished.
I've prepared a summary for you. Click on Show summary button to see it:

Show summary

Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`61.94`	`61.88`	`-0.10%`	`22.16`	`23.01`	`+3.84%`	`56.00`	`56.00`	`0.00%`	`104.00`	`108.00`	`+3.85%`	`146.00`	`150.00`	`+2.74%`	`10872.00`	`10818.00`	`-0.50%`

Have a great time!

dkharms · 2026-04-16T14:31:59Z

@seqbenchbot up main bulk

seqbenchbot · 2026-04-16T14:32:02Z

Nice, @dkharms <(-^,^-)=b!

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Identificator for your ongoing benchmark - ddbdf38d.

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github-actions · 2026-04-16T14:37:15Z

🔴 Performance Degradation

Some benchmarks have degraded compared to the previous run.
Click on Show table button to see full list of degraded benchmarks.

Show table

Name	Previous	Current	Ratio	Verdict
`AndTree/size=1000000-4`	`124d46`	`0e59a4`
	`4.56 ns/op`	`5.11 ns/op`	`1.12`	`🔴`
`Sealing_NoSort-4`	`124d46`	`0e59a4`
	`1155972995.00 ns/op`	`1329586811.00 ns/op`	`1.15`	`🔴`
`Sealing_WithSort-4`	`124d46`	`0e59a4`
	`2189462576.00 ns/op`	`2513488819.00 ns/op`	`1.15`	`🔴`

dkharms · 2026-04-16T16:04:50Z

@seqbenchbot down ddbdf38d

seqbenchbot · 2026-04-16T16:04:54Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator ddbdf38d was finished.
I've prepared a summary for you. Click on Show summary button to see it:

Show summary

Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`63.38`	`62.43`	`-1.50%`	`23.95`	`22.96`	`-4.13%`	`57.00`	`56.00`	`-1.75%`	`112.00`	`108.00`	`-3.57%`	`153.50`	`151.00`	`-1.63%`	`130229.00`	`130316.00`	`+0.07%`

Have a great time!

dkharms · 2026-04-16T16:07:25Z

@seqbenchbot up main bulk

seqbenchbot · 2026-04-16T16:07:28Z

Nice, @dkharms <(-^,^-)=b!

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dkharms · 2026-04-17T10:09:14Z

@seqbenchbot down 12d95a0e

seqbenchbot · 2026-04-17T10:09:17Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator 12d95a0e was finished.
I've prepared a summary for you. Click on Show summary button to see it:

Show summary

Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`64.26`	`63.66`	`-0.93%`	`24.23`	`23.58`	`-2.68%`	`58.00`	`57.00`	`-1.72%`	`112.00`	`111.00`	`-0.89%`	`160.00`	`153.50`	`-4.06%`	`1553308.00`	`1553207.00`	`-0.01%`

Have a great time!

dkharms · 2026-04-17T10:09:56Z

@seqbenchbot up main bulk

seqbenchbot · 2026-04-17T10:09:58Z

Nice, @dkharms <(-^,^-)=b!

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dkharms · 2026-04-17T11:38:40Z

@seqbenchbot down d1043cea

seqbenchbot · 2026-04-17T11:38:44Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator d1043cea was finished.
I've prepared a summary for you. Click on Show summary button to see it:

Show summary

Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`63.77`	`62.88`	`-1.40%`	`23.26`	`23.02`	`-1.02%`	`58.00`	`57.00`	`-1.72%`	`111.00`	`109.50`	`-1.35%`	`152.00`	`151.50`	`-0.33%`	`123732.00`	`123857.00`	`+0.10%`

Have a great time!

dkharms · 2026-04-17T11:57:23Z

@seqbenchbot up main search-keyword-exact-match-warm

seqbenchbot · 2026-04-17T11:57:27Z

Nice, @dkharms <(-^,^-)=b!

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dkharms · 2026-04-17T12:17:32Z

@seqbenchbot down caad43de

seqbenchbot · 2026-04-17T12:17:35Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator caad43de was finished.
I've prepared a summary for you. Click on Show summary button to see it:

Show summary

Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`61.38`	`60.93`	`-0.73%`	`19.34`	`18.90`	`-2.28%`	`57.00`	`56.00`	`-1.75%`	`100.00`	`98.00`	`-2.00%`	`131.50`	`130.00`	`-1.14%`	`2450.00`	`2450.00`	`0.00%`
`service:payment-backend-eu AND k8s_namespace:prod`	warm	`98.10`	`96.44`	`-1.69%`	`53.46`	`54.54`	`+2.03%`	`90.00`	`91.00`	`+1.11%`	`206.00`	`205.00`	`-0.49%`	`250.50`	`255.00`	`+1.80%`	`11285.00`	`11273.00`	`-0.11%`

Have a great time!

dkharms · 2026-04-17T12:17:54Z

@seqbenchbot up main mixed

seqbenchbot · 2026-04-17T12:17:58Z

Nice, @dkharms <(-^,^-)=b!

Your request was successfully served.
Identificator for your ongoing benchmark - 1d4eb6bd.

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dkharms · 2026-04-18T09:39:30Z

@seqbenchbot down 1d4eb6bd

seqbenchbot · 2026-04-18T09:39:34Z

Nice, @dkharms <(-^,^-)=b!

The benchmark with identificator 1d4eb6bd was finished.
I've prepared a summary for you. Click on Show summary button to see it:

Show summary

Query	Type	`mean (ms)`			`stddev (ms)`			`p(50) (ms)`			`p(95) (ms)`			`p(99) (ms)`			`iterations`
Query	Type	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff	base	comp	diff
`bulk`	warm	`76.50`	`77.35`	`+1.11%`	`64.51`	`65.92`	`+2.19%`	`59.00`	`59.00`	`0.00%`	`174.00`	`181.00`	`+4.02%`	`384.00`	`385.00`	`+0.26%`	`1836773.00`	`1834692.00`	`-0.11%`
`service:payment-backend-eu AND k8s_namespace:prod AND level:[0 to 3] AND ( message:'failed' OR message:'timeout' )`	warm	`105.47`	`105.03`	`-0.42%`	`127.19`	`124.46`	`-2.15%`	`70.00`	`68.00`	`-2.86%`	`323.50`	`328.50`	`+1.55%`	`714.00`	`707.50`	`-0.91%`	`458701.00`	`458676.00`	`-0.01%`

Have a great time!

dkharms changed the title ~~336 sealing split~~ refactor: split .index file into multiple Mar 31, 2026

dkharms force-pushed the 336-sealing-split branch from b0caec8 to 20ecd57 Compare March 31, 2026 13:34

dkharms added the epic/compaction label Apr 1, 2026

dkharms force-pushed the 336-sealing-split branch from d73ef96 to 47289a3 Compare April 2, 2026 08:45

dkharms marked this pull request as ready for review April 2, 2026 08:46

eguguchkin self-requested a review April 6, 2026 10:21

dkharms force-pushed the 336-sealing-split branch from daaec7e to f0f2fbe Compare April 16, 2026 14:28

perf: unsafe way to receive lids

365782b

perf: use linear array for token ids

4acc3e9

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