TEST PR [IGNORE PLEASE]#16738
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* add-intro * Add-motivation * review-suggestions * Update pca.rst
added predict_rules. added example for algorithm. added max_categorical_levels example. added max_num_rules example added min_rule_length example. added model_type example. added distribution example added rule_generateion_ntrees example.
…6404) * ht/base example * ht/added prediction * ht/code test & example headers * ht/fixed rendering
…k] [nochecks] (#16394) * ht/constrained glm integration * ht/max_iterations * ht/initial review equations * ht/remove below eq5 * ht/added in examples * ht/requested changes
… (#16426) * upgrade google-cloud-storage to newest * upgarde protobuf and exclude the one from hadoop-common
* downgrade google gcs * upgrade only protobuf
* ht/initial hglm * ht/added descriptions, ordered, values * ht/references * ht/pulled old intro; defining hlm to own section * ht/thru pg2 * ht/first thru HLM section * ht/next section * ht/added to available algo-params * ht/next section draft * ht/equation fixes * ht/next section * ht/weekend pause * ht/draft log-likelihood * ht/alternate log-likelihood & updated refs * ht/pulling hglm from algo-params & glm page * ht/end piece - example stand-in - glm family image add-in for shared algo-params * ht/requested updates * ht/removed intro * ht/requested updates * ht/added r examples * ht/requested changes rd.2 * ht/requetsed changed rd.3
* GH-8487: add HGLM as a separate toolbox. GH-8487: crafting HGLM parameters. GH-8487: implement EM algo. GH-8487: forming the fixed matrices and vectors. GH-8487: add test to make sure correct initialization of fixed, random coefficients, sigma values and T matrix. GH-8487: Finished implementing EM to estimate fixed coefficients, random coefficients, tmat and tauEVar GH-8487: finished implementing prediction but still need to figure out the model metrics calculation. GH-8487: Adding support for models without random intercept. GH-8487: adding normalization and denormalization of coefficients for fixed and random. GH-8487: Completed prediction implementation and added tests to make sure prediction is correct when standardize=true/false, random_intercept = true/false. GH-8487: fixing model metric classes. GH-8487: add python and R tests. GH-8487: adding hooks to generate synthetic data. GH-8487: added scoring history, model summary, coefficient tables. GH-8487: added modelmetrics for validation frame. GH-8487: From experiment to find best tauEVar calculation process. The one in equation 10 is best. GH-8487: add capability in Python client to extract scoring history, model summary, model metrics, model coefficients (fixed and random), icc, T matrix, residual variance. GH-8487: done checking scoring history, model summary and model metrics. GH-8487: added R client test for utility functions. GH-8487: use lambda_ instead lf Lambda in pyunit_benign_glm.py GH-8487: remove standardize from HGLM as the convention does not do standardization. Co-authored-by: Veronika Maurerová <maurever@users.noreply.github.com>
…delines [nocheck] (#16183) * ht/welcome massive restructure * ht/added getting started * ht/added flow users * ht/added python users * ht/added r users * ht/added sparkling users * ht/added api users * ht/added java users * ht/added hadoop users * ht/added docker users * ht/added kubernetes users * ht/added experienced users * ht/welcome & docker page fixes * ht/hadoop page fixes * ht/getting started page fixes * ht/link fixes * ht/link fixes * ht/link & spacing fixes * ht/minor fix * ht/direct link for several sections * ht/h2o > h2o-3 + others several frm >from note/admonition fixes reorder hadoop example several title lengthens * ht/flow algo section w/ links to algo pages * ht/added available algos + linux fix * Update h2o-docs/src/product/getting-started/docker-users.rst Co-authored-by: Adam Valenta <adam.valenta@h2o.ai> * Update h2o-docs/src/product/getting-started/docker-users.rst Co-authored-by: Adam Valenta <adam.valenta@h2o.ai> * ht/requested updates; updated flow list to reflect app * ht/added infogram to welcome page * ht/rerun checks --------- Co-authored-by: Adam Valenta <adam.valenta@h2o.ai>
Implement the remove offset effects feature into the GLM algorithm. Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com> Co-authored-by: Tomáš Frýda <tomas.fryda@h2o.ai> Co-authored-by: Claude Code
* Fix inconsistencies * Incorporate Veronika's suggestions
* Add remove_offset_effect MOJO support # Conflicts: # h2o-algos/src/main/java/hex/glm/GLMModel.java # Conflicts: # h2o-algos/src/main/java/hex/glm/GLMModel.java * Fix test * Potential fix for code scanning alert no. 396: Local information disclosure in a temporary directory Co-authored-by: Copilot Autofix powered by AI <62310815+github-advanced-security[bot]@users.noreply.github.com> * Update h2o-algos/src/test/java/hex/glm/GLMMojoControlVarsOffsetTest.java Co-authored-by: Veronika Maurerová <maurever@users.noreply.github.com> * Incorporate Veronika's suggestion --------- Co-authored-by: Copilot Autofix powered by AI <62310815+github-advanced-security[bot]@users.noreply.github.com> Co-authored-by: Veronika Maurerová <maurever@users.noreply.github.com>
…pe) (#16835) * GH-16566 - Add per-test timeout rule to TestUtil Adds a JUnit Timeout rule that fails individual tests with TestTimedOutException instead of hanging the JVM. Default 10 minutes, configurable via -Dtest.timeout.seconds. Prevents a single deadlocked test from causing Jenkins to SIGTERM the entire stage. * GH-16566 - Ignore flaky AdaBoost DeepLearning weak-learner test testBasicTrainAndScoreDeepLearning hangs intermittently on Java 8/11 due to a model-lock race in DeepLearningDriver.onExceptionalCompletion: the main thread blocks on a model whose FJ worker already threw. * GH-16566 - Fix unmatched Scope.exit() in ParseTestOrc.testParseAllOrcs The test called Scope.exit() in finally without a matching Scope.enter() at the top, popping a scope it never pushed. It usually got rescued by sibling tests leaking enters in the shared JVM; under newer JDK 17 test ordering the donor scope is gone and the assertion fires.
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This PR is created for Test the h2o-3 nighly merge GHA workflow.