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@ga4gh

Global Alliance for Genomics and Health

An international coalition, formed to enable the sharing of genomic and clinical data.

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  1. ga4gh-schemas ga4gh-schemas Public archive

    Models and APIs for Genomic data. RETIRED 2018-01-24

    Python 221 112

  2. benchmarking-tools benchmarking-tools Public

    Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

    HTML 210 46

  3. ga4gh-server ga4gh-server Public archive

    Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Python 99 91

  4. phenopacket-schema phenopacket-schema Public

    Repository for the GA4GH phenopacket schema

    Java 98 31

  5. vrs vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    Jupyter Notebook 96 38

  6. task-execution-schemas task-execution-schemas Public

    93 30

Repositories

Showing 10 of 142 repositories
  • analytics-dashboard-ui Public

    The UI for the embedded analytics dashboard on GA4GH metrics

    ga4gh/analytics-dashboard-ui’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Apr 9, 2026
  • va-spec Public

    An information model for representing variant annotations.

    ga4gh/va-spec’s past year of commit activity
    Jupyter Notebook 27 Apache-2.0 6 113 (1 issue needs help) 7 Updated Apr 9, 2026
  • analytics-dashboard Public

    Embedded analytics dashboard on GA4GH metrics

    ga4gh/analytics-dashboard’s past year of commit activity
    Jupyter Notebook 2 0 9 5 Updated Apr 9, 2026
  • ga4gh-impl-registry Public

    GA4GH Implementation Registry

    ga4gh/ga4gh-impl-registry’s past year of commit activity
    Java 0 Apache-2.0 0 0 2 Updated Apr 9, 2026
  • vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    ga4gh/vrs’s past year of commit activity
    Jupyter Notebook 96 Apache-2.0 38 32 (2 issues need help) 3 Updated Apr 8, 2026
  • htsget-refserver Public

    Reference server implementation for the GA4GH HTSget API standard.

    ga4gh/htsget-refserver’s past year of commit activity
    Go 12 Apache-2.0 5 8 3 Updated Apr 8, 2026
  • gks-portal Public
    ga4gh/gks-portal’s past year of commit activity
    3 MIT 1 30 0 Updated Apr 6, 2026
  • vrs-python Public

    GA4GH Variation Representation Python Implementation

    ga4gh/vrs-python’s past year of commit activity
    Python 62 Apache-2.0 41 67 (1 issue needs help) 1 Updated Apr 6, 2026
  • quality-control-wgs Public

    GA4GH Quality Control of Whole Genome Sequencing's metrics definition, benchmark resources and reference implementations

    ga4gh/quality-control-wgs’s past year of commit activity
    Jupyter Notebook 23 Apache-2.0 6 4 1 Updated Apr 1, 2026
  • phenopacket-schema Public

    Repository for the GA4GH phenopacket schema

    ga4gh/phenopacket-schema’s past year of commit activity
    Java 98 BSD-3-Clause 31 46 6 Updated Mar 30, 2026
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