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Releases: TRON-Bioinformatics/tronflow-vcf-postprocessing

Release list

v3.1.4

v3.1.4 Latest
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@ozlemmuslu ozlemmuslu released this 14 Apr 08:30
v3.1.4
26c9653
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Upgrade Vafator to v3.0.0

There were breaking changes in this Vafator release.

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v3.1.3

v3.1.3

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@LKress LKress released this 23 Jan 13:30
v3.1.3
90eca4a
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What's Changed

  • Update 04_vafator.nf by @LKress in #19
  • Update 04_vafator.nf by @ozlemmuslu in #21
  • -> bumped vafator version back to 2.2.0

Full Changelog: v3.1.2...v3.1.3

Contributors

ozlemmuslu and LKress
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v3.1.2

v3.1.2 Pre-release
Pre-release

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@LKress LKress released this 22 Jan 14:23
v3.1.2
8cd9e97
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What's Changed

  • Fix conda env issues on Ubuntu by @ozlemmuslu in #18
  • Downgrade VAFATOR to version 2.0.3

New Contributors

Full Changelog: v3.1.1...v3.1.2

Contributors

ozlemmuslu
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v3.1.1

v3.1.1

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@LKress LKress released this 01 Jul 12:21
v3.1.1
71dff12
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What's Changed

  • Added CI profile and update conda profile by @LKress in #17

New Contributors

Full Changelog: v3.1.0...v3.1.1

Contributors

LKress
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v3.1.0

v3.1.0

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@priesgo priesgo released this 01 Feb 06:35
v3.1.0
a882743
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What's Changed

Full Changelog: v3.0.0...v3.1.0

Contributors

priesgo
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v3.0.0

v3.0.0

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@priesgo priesgo released this 20 Oct 06:01
v3.0.0
2f5928f
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Changes

  • Introduce WhatsHap for phasing of diploid genotyped VCFs

Bugfix

  • Fix BCFtools csq annotation
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v2.5.0

v2.5.0

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@priesgo priesgo released this 11 Oct 09:49
v2.5.0
6a71584
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Changes

  • Bump VAFator version to v2.1.0
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Release v2.4.1

Release v2.4.1

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@priesgo priesgo released this 16 Aug 05:28
v2.4.1
54f1033
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Changes

  • Add parameter --snpeff_memory to avoid OutOfMemory error in SnpEfff for some samples
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Release v2.4.0

Release v2.4.0

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@priesgo priesgo released this 15 Aug 18:51
v2.4.0
9aead35
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Changes

  • Add BCFtools csq to perform functional annotations
  • Upgrade VAFator to 2.0.3
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Release v2.3.1

Release v2.3.1

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@priesgo priesgo released this 15 Aug 05:36
v2.3.1
25c96ca

Bugfix

  • Version 2.0.1 of vafator has a bug when providing replicates, upgrading to 2.0.2 fixes it
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