Error in runTRVAE

[lazappi]

I am getting the following error from runTRVAE().

AttributeError: module 'trvae' has no attribute 'archs'

As far as I can see there is no trvae.archs submodule, for example if I tab complete trvae. I get:

trvae.data      trvae.dl        trvae.metrics   trvae.models    trvae.mt        trvae.pl        trvae.plotting  trvae.tl        trvae.utils     trvae.warnings

Possibly I have messed up the installation somehow? I have this version of trvae installed.

trvae                     1.1.2                    pypi_0    pypi

[LuckyMD]

check the trVAE PR #136. There was quite a lot of changes to how trVAE is run with version 1. We benchmarked version 0.0.1 with this function. There are also new dependencies. Basically, trVAE underwent a large refactoring.

[lazappi]

Ah ok. I'm using the environment from the danielStrobl-patch1 branch so my fault. I thought I was probably missing something. I guess this will be fixed once that branch is merged so can probably close this unless you want to leave it for anyone else who has this issue.

[LuckyMD]

i think let's leave it for the moment. Unfortunately the tag for trVAE version 0.0.1 doesn't exist on the github anymore... So it's hard to reproduce those results atm.