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AlexMikhalevclaude
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feat: add e2e pipeline verification example (49 checks, all pass)
Comprehensive end-to-end test covering: - Data file verification (SNOMED thesaurus, UMLS artifact, CPIC, UMLS TSV) - KG population with 18 nodes, 14 edges, IS-A hierarchy traversal - Treatment lookups and contraindication checks via adjacency index - Symbolic embeddings with similarity scoring - Entity extraction via Aho-Corasick (7 entities in 0.012ms) - UMLS artifact loading (1.4M patterns, 4.3M concepts from 199MB) - PGx validation (CYP2C19, CYP2D6 metabolizer profiles) - MedGemma inference (mock client, Osimertinib recommendation) - Full 6-step consultation pipeline Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
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