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171 repositories

Clinical_Data_Management
Public
CSS
•
MIT License
•1•0•11•3•Updated Aug 13, 2026Aug 13, 2026
Machine-Learning
Public
JavaScript
•0•1•0•0•Updated Aug 11, 2026Aug 11, 2026
bioc2026Intro
Public
Workshop Materials for Introductory Bioconductor 2026 workshop
Dockerfile
•
Other
•1•2•0•0•Updated Aug 11, 2026Aug 11, 2026
ITN_course_search
Public
A searchable table for ITN courses
search-tool itn
search-tool itn
R
•
MIT License
•0•0•5•1•Updated Aug 10, 2026Aug 10, 2026
AnVIL_Collection
Public
📚 An auto-generating collection of all materials related to the AnVIL and GDSCN projects
website anvil content-library
website anvil content-library gdscn edtech-software
R
•
Creative Commons Attribution 4.0 International
•1•0•1•1•Updated Aug 9, 2026Aug 9, 2026
DaSL_Collection
Public
📚 An auto-generating library of Data Science Lab Github-based content
website content-library
website content-library
CSS
•
MIT License
•0•0•0•0•Updated Aug 9, 2026Aug 9, 2026
AnVIL_Outreach_Metrics
Public
Metricminer Dashboard for the AnVIL Outreach Team and associated metrics
R
•
MIT License
•0•0•0•2•Updated Aug 9, 2026Aug 9, 2026
AI-GENe_surveys
Public
HTML
•
MIT License
•0•0•0•0•Updated Aug 5, 2026Aug 5, 2026
DataViz_Considerations
Public
ITN course "Considerations for Bioinformatic Data Visualization" focusing on considerations for best practices in data visualization
data4all
data4all
CSS
•
Creative Commons Attribution 4.0 International
•0•1•37•0•Updated Aug 4, 2026Aug 4, 2026
Proactive_Data_Management_and_Sharing
Public
Data management and sharing best practices for biomedical data handling folks
security privacy course
security privacy course reproducible-research reproducible-science data-management reproducibility hipaa data-sharing itn-course
TeX
•
Creative Commons Attribution 4.0 International
•0•0•6•0•Updated Aug 1, 2026Aug 1, 2026
Data_on_AnVIL
Public
This is a guide to all the ways to access, upload, and use data on NHGRI's AnVIL platform.
course anvil vignettes
course anvil vignettes scalable-computing
CSS
•
Creative Commons Attribution 4.0 International
•1•0•12•1•Updated Aug 1, 2026Aug 1, 2026
GEMs
Public
💎 Materials & Portal for the Genomics Education Modules (GEMs) Program at Fred Hutch
education bioinformatics genomics
education bioinformatics genomics entry-level entry-level-bioinformatics data4all
TeX
•
MIT License
•0•0•51•2•Updated Aug 1, 2026Aug 1, 2026
Choosing_Genomics_Tools
Public
Based on their genomic data types and goals, this course will help learners find educational resources and tools to help them process and interpret data.
course data-processing genomic-data
course data-processing genomic-data data-interpretation itn-course audience-researchers category-fundamentals-tools-resources resources-and-tools launched-aug2023 data4all
TeX
•
Creative Commons Attribution 4.0 International
•10•18•39•1•Updated Aug 1, 2026Aug 1, 2026
DataViz_Practice
Public
ITN course "Cancer Informatics Data Visualization in Practice" focusing on practicing best practices in data visualization
data4all
data4all
CSS
•
Creative Commons Attribution 4.0 International
•0•0•4•2•Updated Aug 1, 2026Aug 1, 2026
AI_for_Efficient_Programming
Public
This course on AI for software development explores the use of AI large language models (ChatGPT, Bard, etc) and their potential benefits and challenges. Hands-…
course chatbot artificial-intelligence
course chatbot artificial-intelligence ethics learn-ai llm software-learning hutch-course itn-course audience-researchers
CSS
•
Creative Commons Attribution 4.0 International
•1•5•11•0•Updated Aug 1, 2026Aug 1, 2026
GitHub_Automation_for_Scientists
Public
This course walks through why's and the how's for using automation to boost scientific software development process.
automation course reproducible-research
automation course reproducible-research templates activities reproducibility troubleshooting github-actions itn-course audience-software-developers
CSS
•
Creative Commons Attribution 4.0 International
•2•1•4•0•Updated Aug 1, 2026Aug 1, 2026
itcr2026_workshops
Public
Website for materials, resources, and activity instructions for the ITCR Annual Meeting 2026 Workshops
itn-workshop
itn-workshop
CSS
•
MIT License
•0•0•0•0•Updated Aug 1, 2026Aug 1, 2026
decode_dataviz_workshop
Public
Materials associated with the background information and activities for the DeCoDE data viz workshop
itn-workshop
itn-workshop
CSS
•
MIT License
•1•0•0•0•Updated Aug 1, 2026Aug 1, 2026
bench_to_bytes
Public
A guide for wet bench researchers about why considering computational and data science skills can be useful for all types of scientific work.
data4all
data4all
CSS
•
Creative Commons Attribution 4.0 International
•0•0•5•5•Updated Aug 1, 2026Aug 1, 2026
Intermediate_R
Public
The course continues building programming fundamentals in R programming and data analysis. You will learn how to make use of complex data structures, use custom…
hutch-course data-science-programming
hutch-course data-science-programming
JavaScript
•
Creative Commons Attribution 4.0 International
•0•1•4•1•Updated Aug 1, 2026Aug 1, 2026
reproducibility_capstone
Public
A capstone course for the ITN Reproducibility Series with hands-on activities
docker reproducible-research reproducibility
docker reproducible-research reproducibility workflow-automation capstone-project github-secrets github-actions itn-course audience-researchers audience-software-developers
CSS
•
Creative Commons Attribution 4.0 International
•0•0•3•0•Updated Aug 1, 2026Aug 1, 2026
Weni_Capstone_Project
Public
R
•0•0•0•0•Updated Jul 27, 2026Jul 27, 2026
David_S_Capstone_Project
Public
HTML
•0•0•0•0•Updated Jul 24, 2026Jul 24, 2026
gems_surveys
Public
💎 A collection of surveys for GEMs
R
•0•0•0•1•Updated Jul 21, 2026Jul 21, 2026
2026-07-20-fredhutch-online
Public
DC Genomics Workshop for Fred Hutch
HTML
•
Other
•0•0•0•0•Updated Jul 15, 2026Jul 15, 2026
daseh_surveys
Public
Survey source code for the DaSEH Program
HTML
•1•0•0•0•Updated Jul 10, 2026Jul 10, 2026
SOTA2024_ReportOut
Public
Materials associated with the Report Out for the State of the AnVIL 2024
HTML
•
MIT License
•0•1•0•0•Updated Jun 29, 2026Jun 29, 2026
DaSEH
Public
🌼 Collection of materials to accompany the R25 funded "Data Science for Environmental Health" short course
data-science course tidyverse
data-science course tidyverse public-health beginner beginner-friendly r-programming niehs environmental-health beginner-programming
HTML
•
MIT License
•4•2•42•2•Updated Jun 29, 2026Jun 29, 2026
AnVIL_Demos
Public
⏱ 30-minute demos and tutorials from our live AnVIL series
cloud course research
cloud course research module genomics cloud-computing anvil scalable-computing
CSS
•
Creative Commons Attribution 4.0 International
•3•0•1•0•Updated Jun 15, 2026Jun 15, 2026
FH_Cluster_101
Public
This course introduces users to the Fred Hutch Cluster. It will lead users through account creation, using the terminal, connecting to the cluster, submitting j…
course command-line hpcc
course command-line hpcc computing-cluster scalable-computing hutch-course
JavaScript
•
Creative Commons Attribution 4.0 International
•2•0•8•1•Updated Jun 11, 2026Jun 11, 2026

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Fred Hutch Data Science Lab

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171 repositories

Clinical_Data_Management

Machine-Learning

bioc2026Intro

ITN_course_search

AnVIL_Collection

DaSL_Collection

AnVIL_Outreach_Metrics

AI-GENe_surveys

DataViz_Considerations

Proactive_Data_Management_and_Sharing

Data_on_AnVIL

GEMs

Choosing_Genomics_Tools

DataViz_Practice

AI_for_Efficient_Programming

GitHub_Automation_for_Scientists

itcr2026_workshops

decode_dataviz_workshop

bench_to_bytes

Intermediate_R

reproducibility_capstone

Weni_Capstone_Project

David_S_Capstone_Project

gems_surveys

2026-07-20-fredhutch-online

daseh_surveys

SOTA2024_ReportOut

DaSEH

AnVIL_Demos

FH_Cluster_101

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171 repositories