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@cnpem Brazilian Center for Research in Energy and Materials (CNPEM)

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    85 repositories

    • epics-in-docker

      Public
      Container images with EPICS and modules
      Shell
      •4•11•15•13•Updated Aug 13, 2026Aug 13, 2026

    • MHCXGraph

      Public
      A Python package for detecting potential T cell receptor cross-reactivity based on peptide–MHC structures
      similarityproteingraph-based-model
      similarityproteingraph-based-model
      Python
      •
      GNU Affero General Public License v3.0
      •0•5•0•2•Updated Aug 13, 2026Aug 13, 2026

    • AtomPacker

      Public
      A python package for packing nanoclusters into supramolecular cages.
      modelingpython-packagenanoparticles
      modelingpython-packagenanoparticlesnanoclusterssupramolecular-cagesatom-packing
      Python
      •
      GNU General Public License v3.0
      •0•2•0•2•Updated Aug 12, 2026Aug 12, 2026

    • ADGStreamer

      Public
      ADGStreamer is an AreaDetector driver that uses GStreamer to acquire images from network video streams and publish them as NDArrays through EPICS.
      Makefile
      •0•0•0•1•Updated Aug 11, 2026Aug 11, 2026

    • sophys-common

      Public
      A collection of Bluesky and Ophyd utility code for SIRIUS beamlines and support groups
      kafkablueskyophyd
      kafkablueskyophydsophys
      Python
      •
      GNU Lesser General Public License v3.0
      •3•5•7•7•Updated Aug 11, 2026Aug 11, 2026

    • vfio-driver-libs

      Public
      Library to develop userspace device drivers with DMA capability through the VFIO module
      C++
      •
      GNU Lesser General Public License v3.0
      •0•1•0•0•Updated Aug 11, 2026Aug 11, 2026

    • sophys-web

      Public
      Bluesky http-server client apps developed by the Control Software Group @LNLS/CNPEM.
      TypeScript
      •
      GNU General Public License v3.0
      •3•4•10•3•Updated Aug 10, 2026Aug 10, 2026

    • mxcubecore

      Public
      Backend used by MXCuBE
      Python
      •
      GNU Lesser General Public License v3.0
      •58•0•0•1•Updated Aug 6, 2026Aug 6, 2026

    • ip-orch

      Public
      Machine Learning Interatomic Potentials orchestrator
      Python
      •
      MIT License
      •1•9•1•0•Updated Aug 6, 2026Aug 6, 2026

    • sci-ai-wiki

      Public
      HTML
      •0•6•0•0•Updated Aug 4, 2026Aug 4, 2026

    • hpc-containers

      Public
      Apptainer/Singularity containers for HPC clusters
      singularityapptainer
      singularityapptainer
      Lua
      •1•0•0•1•Updated Aug 3, 2026Aug 3, 2026

    • ADPimega

      Public
      EPICS areaDetector driver for the PiMega detectors
      C++
      •
      Other
      •3•6•13•6•Updated Aug 3, 2026Aug 3, 2026

    • 3hc-llrf-scripts

      Public
      Scripts for the Low-Level Radio Frequency (LLRF) control system of Sirius's 3rd Harmonic Cavity.
      GNU General Public License v3.0
      •0•0•0•1•Updated Jul 31, 2026Jul 31, 2026

    • spidr4py

      Public
      Nikhef spidr4py repository mirror
      Python
      •
      MIT License
      •0•1•0•0•Updated Jul 29, 2026Jul 29, 2026

    • bluesky

      Public
      experiment orchestration and data acquisition
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •119•0•0•0•Updated Jul 28, 2026Jul 28, 2026

    • ad-eiger-epics-ioc

      Public
      EPICS areaDetector IOCs based on ADEiger driver.
      Batchfile
      •0•0•0•0•Updated Jul 25, 2026Jul 25, 2026

    • askdataverse

      Public
      Experimental code leveraging LLM applications within Dataverse
      Python
      •
      MIT License
      •4•0•0•0•Updated Jul 21, 2026Jul 21, 2026

    • sophys-live-view

      Public
      Live and offline data visualizer, mainly for Bluesky-based systems
      Python
      •
      GNU Lesser General Public License v3.0
      •0•1•1•1•Updated Jul 20, 2026Jul 20, 2026

    • pmac

      Public
      Driver for the Delta Tau PMAC motion controller family.
      C++
      •
      Apache License 2.0
      •25•1•0•0•Updated Jul 20, 2026Jul 20, 2026

    • mxcubeweb-lnls

      Public
      LNLS configuration for MXCuBE Web
      0•0•0•1•Updated Jul 16, 2026Jul 16, 2026

    • mbed-mods

      Public
      Mbed OS-based modules providing common functionalities and a standardized way of structuring the firmware.
      C++
      •
      GNU General Public License v3.0
      •1•0•2•2•Updated Jul 15, 2026Jul 15, 2026

    • mbed-template-fw

      Public
      LNLS Template for Mbed OS–Based Firmwares.
      C++
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 14, 2026Jul 14, 2026

    • ADPerkinElmer

      Public
      An EPICS areaDetector driver for the flat-panel amorphous silicon detectors from PerkinElmer (iow Varex). The driver is based upon the XISL library provided by …
      C++
      •
      Other
      •8•0•0•0•Updated Jul 13, 2026Jul 13, 2026

    • 3hc-llrf-gw

      Public
      Gateware for the Sirius' 3rd Harmonic Cavity (3HC) Low-Level Radio Frequency (LLRF)
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 13, 2026Jul 13, 2026

    • sophys-cli-core

      Public
      Core functionality for the sophys-cli project, a commandline interface for Bluesky orchestration at SIRIUS
      Python
      •
      GNU Lesser General Public License v3.0
      •1•1•2•0•Updated Jul 13, 2026Jul 13, 2026

    • sophys-cli-extensions

      Public
      SIRIUS-specific extensions for the sophys-cli project, dealing with code customized to SIRIUS beamlines
      Python
      •
      GNU General Public License v3.0
      •1•2•0•1•Updated Jul 13, 2026Jul 13, 2026

    • olaparib-reconstruction

      Public
      Reconstructs the resistence continnum of olaparib adaptation in Kuramochi ovarian cancer cells
      R
      •0•0•0•0•Updated Jun 30, 2026Jun 30, 2026

    • mxcubeweb

      Public
      MXCuBE-Web
      JavaScript
      •
      GNU Lesser General Public License v3.0
      •44•0•0•0•Updated Jun 30, 2026Jun 30, 2026

    • bluesky-httpserver

      Public
      HTTP API to Queueserver
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •14•0•0•0•Updated Jun 24, 2026Jun 24, 2026

    • ad-sim-epics-ioc

      Public
      ADSimDetector IOC
      Batchfile
      •1•0•0•1•Updated Jun 23, 2026Jun 23, 2026
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