review ContrastsMissing get_contrasts

[wolski]

• get_contrasts
  ** get_imputed_contrasts
  *** missigness_impute_factors_interactions(pepIntensity, config, value = "long" )
  **** .missigness_impute_interactions
  ***** interaction_missing_stats
  *** get_contrast(ungroup(imp), config$table$hierarchy_keys(), Contr)
  *** aggregate_contrast(ungroup(imputed2), subject_Id = config$table$hierarchy_keys_depth())
  ** summarize_stats

[wolski]

possible replace with -> get LOD -> impute -> build models with lm -> when computing contrasts update degrees of freedom etc.

[wolski]

• update of statistics when computing interaction is still needed
  • see vignette posthoc InteractionAnalysis in prolfquapp.
  • https://github.com/prolfqua/prolfquapp/blob/master/vignettes/PostHocInteractionAnalysis.Rmd

[wolski]

remove code from:
https://github.com/fgcz/prolfqua/blob/Modelling2R6/R/DEPRECATED.R