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Move TODO documents to workspace repository
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R/ContrastsLimma.R

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@@ -537,7 +537,7 @@ build_model_limma_impute <- function(
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#' external weights enter the preliminary fit (so the trend estimation accounts
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#' for measurement precision) and are multiplied element-wise with the vooma
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#' weights for the final fit. See the voom integration notes in
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#' \code{TODO/TODO_limma_voom_integration.md} for the mathematical basis.
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#' \code{../TODO/prolfqua/Archive/TODO_limma_voom_integration.md} for the mathematical basis.
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#'
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#' @param lfqdata an \code{\link{LFQData}} object (aggregated to protein level)
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#' @param strategy output of \code{\link{strategy_limma}}

TODO/Archive/API_surface_audit.md

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