bioconda debug

Author: diekhans

recipes/intron-prospector/build.sh

@@ -2,17 +2,15 @@
 set -eu -o pipefail
 set -x
 
-ls -1 ${PREFIX}/lib
-ls -1 ${PREFIX}/lib/pkgconfig
-
 # Can not find htslib pkgconfig file for unknown reasons, so
 # also use --with-htslib
 export PKG_CONFIG_PATH=${PREFIX}/lib/pkgconfig:${PKG_CONFIG_PATH:-}
 
 export CPPFLAGS="${CPPFLAGS} -I${PREFIX}/include"
 export LDFLAGS="${LDFLAGS} -L${PREFIX}/lib"
 
-./configure --prefix="${PREFIX}" --with-htslib="${PREFIX}" \
+# --with-htslib="${PREFIX}"
+./configure --prefix="${PREFIX}" \
   CXX="${CXX}" LDFLAGS="${LDFLAGS}" CPPFLAGS="${CPPFLAGS}" \
   CXXFLAGS="${CXXFLAGS}" || cat config.log