slurm-tutorial/sleepytime.sub at master · abalter/slurm-tutorial · GitHub

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#!/bin/sh

### --------  SLURM  ----------- ###
##SBATCH --mail-user=balter@ohsu.edu
##SBATCH --mail-type=ALL
#SBATCH --ntasks=1
#SBATCH --time=2:00:00
#SBATCH --mem=2G

#SBATCH --job-name=testJob
#SBATCH --time=01:00:00
#SBATCH --nodes=1
#SBATCH --ntasks=1
#SBATCH --job-name="sleep"
#SBATCH --array=20-100:20
#SBATCH --output="sleep_%A_%a_%j.out"
#SBATCH --error="sleep_%A_%a_%j.err"
##SBATCH --workdir=$HOME/slurm_tutorial
### -------------------------- ###

### Display all variables set by slurm
#env | grep "^SLURM" | sort

### All my commands for job will go here

echo "job name: $SLURM_JOB_NAME"
echo "SLURM_JOBID: " $SLURM_JOBID
echo "SLURM_ARRAY_TASK_ID: " $SLURM_ARRAY_TASK_ID
echo "SLURM_ARRAY_JOB_ID: " $SLURM_ARRAY_JOB_ID

$HOME/slurm_tutorial/sleepytime.sh $SLURM_ARRAY_TASK_ID

### Kill specific array job
# scancel 1234_9
### Kill all jobs in array
# scancel 1234