updated DOI links

Author: Jimbles

Anonymised_Radiology/readme.md

@@ -2,27 +2,19 @@
 
 ## Usage
 
-Extract all archives `Patient_Reports_01.zip,  Patient_Reports_02.zip ...Patient_Reports_26.zip` from [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.838705.svg)](https://doi.org/10.5281/zenodo.838705) into this directory so the structure is:
+Extract all archives `Patient_Reports_01.zip,  Patient_Reports_02.zip ...Patient_Reports_26.zip` from [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199641.svg)](https://doi.org/10.5281/zenodo.1199641) into this directory so the structure is:
 
 ```
 |---P_01
-|   |---20160504 192137 [ - CT Acute Stroke]
-|   |   |---Series 001 [CT - 2 0]
-|   |   |---Series 003 [CT - Thick Brain 5 0 Head Brain FC21]
-|   |   |...
-|   |---20160505 102132 [ - MR Head]
-|   |   |---Series 201 [MR - DTI P6d noniso]
-|   |   |---Series 202 [MR - isoDWI b1000 iso]
+|   |---func
+|   |   |---sub-01_CT_Plain_Brain_Stroke.json
+|   |   |---sub-01_CT_Plain_Brain_Stroke.nii.gz
 |   |   |...
 |   |---Patient01.pdf
 |---P_03
-|   |---20160510 152102 [ - CT Acute Stroke]
-|   |   |---Series 001 [CT - 2 0]
-|   |   |---Series 003 [CT - Thick Brain 5 0 Head Brain FC21]
-|   |   |...
-|   |---20160511 090538 [ - MR Head]
-|   |   |---Series 201 [MR - DTI P6d noniso]
-|   |   |---Series 202 [MR - isoDWI b1000 iso]
+|   |---func
+|   |   |---sub-03_CT_Plain_Brain_(Stroke).json
+|   |   |---sub-03_CT_Plain_Brain_(Stroke).nii.gz
 |   |   |...
 |   |---Patient03.pdf
 ...

Patients/readme.md

@@ -1,7 +1,7 @@
 # UCLH EIT Dataset - Patients
 
 Extract all archives `Patient_01.zip,  Patient_02.zip ...Patient_26.zip` from [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199529.svg)](https://doi.org/10.5281/zenodo.1199529)
- and [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.838184.svg)](https://doi.org/10.5281/zenodo.838184) into this directory so the structure is:
+ and [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199630.svg)](https://doi.org/10.5281/zenodo.1199630) into this directory so the structure is:
 ```
 |---Patient_01
 |   |---P1_MF1.bdf

readme.md

@@ -48,10 +48,10 @@ plt.plot(EITDATA[6]['VoltagesCleaned']
 ## Raw data files
 The raw `.bdf` files are available should you wish to recreate or alter the processing of this dataset. In total the dataset is **~150GB**, and is thus split into parts based on the Zenodo 50 GB file limit.  Please download the following zip files and extract them into the corresponding folders.
 
--   Subject data:  [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199523.svg)](https://doi.org/10.5281/zenodo.1199523)  into the `./Subjects` folder
+-   Subject data: [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199523.svg)](https://doi.org/10.5281/zenodo.1199523)  into the `./Subjects` folder
 -   Patient data (part 1): [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199529.svg)](https://doi.org/10.5281/zenodo.1199529)  into the `./Patients` folder
--   Patient data (part 2): [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.838184.svg)](https://doi.org/10.5281/zenodo.838184)  into the `./Patients` folder
--   Radiology data:  [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.838705.svg)](https://doi.org/10.5281/zenodo.838705)  into the `./Anonymised_Radiology` folder
+-   Patient data (part 2): [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199630.svg)](https://doi.org/10.5281/zenodo.1199630)  into the `./Patients` folder
+-   Radiology data: [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.1199641.svg)](https://doi.org/10.5281/zenodo.1199641) into the `./Anonymised_Radiology` folder
 
 Example structures for these directories are given in the readmes.